STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr83WD repeat domain containing 83. (317 aa)    
Predicted Functional Partners:
lamtor3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
   
 0.964
sf3b4
Splicing factor 3b, subunit 4.
    
 
 0.954
prpf8
Pre-mRNA processing factor 8.
    
   0.920
gpatch1
G patch domain containing 1.
    
 
 0.915
ccdc12
Coiled-coil domain containing 12.
    
 
 0.689
cwf19l2
CWF19 like cell cycle control factor 2.
   
 
 0.668
LOC109959639
A-Raf proto-oncogene, serine/threonine kinase.
    
 0.619
braf
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.619
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
    
 0.619
map2k1
Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
    
 0.604
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.