STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhpn1Rhophilin, Rho GTPase binding protein 1. (660 aa)    
Predicted Functional Partners:
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.628
chmp4b
Charged multivesicular body protein 4Bb.
   
 0.628
LOC109972406
Uncharacterized protein.
   
 0.628
LOC109951761
Charged multivesicular body protein 4C.
   
 0.628
LOC109973571
UEV and lactate/malate dehyrogenase domains.
    
 0.567
tsg101
Tumor susceptibility 101a.
    
 0.548
LOC109971486
Charged multivesicular body protein 5b.
    
 0.524
chmp5
Charged multivesicular body protein 5a.
    
 0.524
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.522
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 
 0.522
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.