STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109965714Si:ch73-389b16.2. (1568 aa)    
Predicted Functional Partners:
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.614
palb2
Uncharacterized protein.
  
 0.614
ephx1
Epoxide hydrolase; Biotransformation enzyme that catalyzes the hydrolysis of arene and aliphatic epoxides to less reactive and more water soluble dihydrodiols by the trans addition of water. Belongs to the peptidase S33 family.
   
  
 0.607
ptrh2
Peptidyl-tRNA hydrolase 2.
      
 0.579
LOC109960201
Trafficking protein particle complex 6b-like.
      
 0.574
ENSMALP00000030554
SET domain containing 5.
      
 0.571
Aasdh
AMP-binding domain-containing protein.
    
 0.523
aasdh
Aminoadipate-semialdehyde dehydrogenase.
    
 0.523
ilvbl
IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.
     
 0.517
lrrc40
Leucine rich repeat containing 40.
    
 
 0.513
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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