STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMALP00000021232Uncharacterized protein. (273 aa)    
Predicted Functional Partners:
LOC109962983
LIM domain binding 3b.
 
      0.896
ENSMALP00000021243
PDZ domain-containing protein.
 
 
   0.835
LOC109961177
Vinculin a.
   
 0.569
vcl
Vinculin b.
   
 0.569
parva
Parvin, alpha a.
   
 0.567
parvg
Parvin, gamma.
   
 0.567
parvb
Parvin, beta.
   
 0.567
ret
Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.
    
 0.542
ENSMALP00000002712
Uncharacterized protein.
   
 0.531
ctnna2
Catenin (cadherin-associated protein), alpha 2.
   
 0.531
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.