Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109966688 | LOC109974207 | ENSMALP00000015104 | ENSMALP00000012454 | Cytochrome P450, family 26, subfamily A, polypeptide 1. | Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family. | 0.904 |
LOC109966688 | crabp1 | ENSMALP00000015104 | ENSMALP00000021793 | Cytochrome P450, family 26, subfamily A, polypeptide 1. | Cellular retinoic acid binding protein 1a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | 0.421 |
LOC109974207 | LOC109966688 | ENSMALP00000012454 | ENSMALP00000015104 | Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family. | Cytochrome P450, family 26, subfamily A, polypeptide 1. | 0.904 |
LOC109974207 | crabp1 | ENSMALP00000012454 | ENSMALP00000021793 | Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family. | Cellular retinoic acid binding protein 1a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | 0.444 |
crabp1 | LOC109966688 | ENSMALP00000021793 | ENSMALP00000015104 | Cellular retinoic acid binding protein 1a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | Cytochrome P450, family 26, subfamily A, polypeptide 1. | 0.421 |
crabp1 | LOC109974207 | ENSMALP00000021793 | ENSMALP00000012454 | Cellular retinoic acid binding protein 1a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family. | 0.444 |
crabp1 | ppard | ENSMALP00000021793 | ENSMALP00000027063 | Cellular retinoic acid binding protein 1a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | Peroxisome proliferator-activated receptor delta b. | 0.475 |
ppard | crabp1 | ENSMALP00000027063 | ENSMALP00000021793 | Peroxisome proliferator-activated receptor delta b. | Cellular retinoic acid binding protein 1a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. | 0.475 |