Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC109951965 | LOC109972038 | ENSMALP00000008711 | ENSMALP00000022007 | Uncharacterized protein. | Nucleophosmin 1b. | 0.858 |
| LOC109951965 | RPL5 | ENSMALP00000008711 | ENSMALP00000002894 | Uncharacterized protein. | Ribosomal protein L5. | 0.501 |
| LOC109951965 | RPL5-2 | ENSMALP00000008711 | ENSMALP00000020897 | Uncharacterized protein. | Ribosomal protein L5b. | 0.501 |
| LOC109951965 | nop58 | ENSMALP00000008711 | ENSMALP00000018638 | Uncharacterized protein. | NOP58 ribonucleoprotein homolog (yeast). | 0.765 |
| LOC109951965 | tp53 | ENSMALP00000008711 | ENSMALP00000012065 | Uncharacterized protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.536 |
| LOC109968327 | LOC109972038 | ENSMALP00000007756 | ENSMALP00000022007 | Retinoblastoma binding protein 4. | Nucleophosmin 1b. | 0.683 |
| LOC109968327 | LOC109974549 | ENSMALP00000007756 | ENSMALP00000027696 | Retinoblastoma binding protein 4. | WD_REPEATS_REGION domain-containing protein. | 0.900 |
| LOC109968327 | ruvbl1 | ENSMALP00000007756 | ENSMALP00000023162 | Retinoblastoma binding protein 4. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.772 |
| LOC109968327 | tp53 | ENSMALP00000007756 | ENSMALP00000012065 | Retinoblastoma binding protein 4. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.419 |
| LOC109972038 | LOC109951965 | ENSMALP00000022007 | ENSMALP00000008711 | Nucleophosmin 1b. | Uncharacterized protein. | 0.858 |
| LOC109972038 | LOC109968327 | ENSMALP00000022007 | ENSMALP00000007756 | Nucleophosmin 1b. | Retinoblastoma binding protein 4. | 0.683 |
| LOC109972038 | LOC109974549 | ENSMALP00000022007 | ENSMALP00000027696 | Nucleophosmin 1b. | WD_REPEATS_REGION domain-containing protein. | 0.683 |
| LOC109972038 | RPL5 | ENSMALP00000022007 | ENSMALP00000002894 | Nucleophosmin 1b. | Ribosomal protein L5. | 0.742 |
| LOC109972038 | RPL5-2 | ENSMALP00000022007 | ENSMALP00000020897 | Nucleophosmin 1b. | Ribosomal protein L5b. | 0.742 |
| LOC109972038 | eef1g | ENSMALP00000022007 | ENSMALP00000019134 | Nucleophosmin 1b. | Eukaryotic translation elongation factor 1 gamma. | 0.668 |
| LOC109972038 | ncl | ENSMALP00000022007 | ENSMALP00000021214 | Nucleophosmin 1b. | Nucleolin. | 0.858 |
| LOC109972038 | nop58 | ENSMALP00000022007 | ENSMALP00000018638 | Nucleophosmin 1b. | NOP58 ribonucleoprotein homolog (yeast). | 0.675 |
| LOC109972038 | ruvbl1 | ENSMALP00000022007 | ENSMALP00000023162 | Nucleophosmin 1b. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.683 |
| LOC109972038 | tp53 | ENSMALP00000022007 | ENSMALP00000012065 | Nucleophosmin 1b. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.756 |
| LOC109974549 | LOC109968327 | ENSMALP00000027696 | ENSMALP00000007756 | WD_REPEATS_REGION domain-containing protein. | Retinoblastoma binding protein 4. | 0.900 |
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