STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
robo2Roundabout, axon guidance receptor, homolog 2 (Drosophila). (1605 aa)    
Predicted Functional Partners:
LOC109964285
Slit homolog 3 (Drosophila).
   
 0.687
slit2
Slit homolog 2 (Drosophila).
   
 0.670
ENSMALP00000011676
LRRNT domain-containing protein.
   
 0.670
slit1
Slit homolog 1a (Drosophila).
   
 0.670
ENSMALP00000010806
LRRCT domain-containing protein.
   
 0.646
LOC109951658
Nyctalopin.
   
 0.646
ENSMALP00000011650
Uncharacterized protein.
   
 0.630
LOC109952803
Uncharacterized protein.
   
 0.614
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
 0.535
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
 0.516
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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