STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109960505Uncharacterized protein. (227 aa)    
Predicted Functional Partners:
u2af2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.990
ENSMALP00000028610
RRM domain-containing protein.
   
 0.990
ENSMALP00000028575
RRM domain-containing protein.
   
 0.912
LOC109953359
Serine and arginine rich splicing factor 2a.
   
 0.784
LOC109952721
RRM domain-containing protein.
   
 0.784
SRSF3
Serine and arginine rich splicing factor 3b.
   
 0.754
ENSMALP00000030787
RRM domain-containing protein.
   
 0.754
ENSMALP00000010911
Uncharacterized protein.
   
 0.740
ENSMALP00000010922
RRM domain-containing protein.
   
 0.740
LOC109972077
Serine and arginine rich splicing factor 1a.
   
 0.740
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.