STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109966830Interferon regulatory factor. (294 aa)    
Predicted Functional Partners:
irf2
Interferon regulatory factor.
  
0.804
stat1
Signal transducer and activator of transcription.
   
 0.784
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.778
ep300
E1A binding protein p300 b.
    
 0.723
LOC109952679
E1A binding protein p300 a.
    
 0.723
spi1
Spi-1 proto-oncogene b.
   
 
 0.694
tbk1
TANK-binding kinase 1.
   
 0.688
tyk2
Tyrosine-protein kinase.
   
 0.679
LOC109966143
Interferon regulatory factor 10.
  
0.678
stub1
STIP1 homology and U-Box containing protein 1.
    
 
 0.636
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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