STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109952743Two pore segment channel 3. (722 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.992
wdr35
WD repeat-containing protein 35.
    
 0.703
IFT122
Intraflagellar transport 122.
   
 0.692
wdr19
WD repeat domain 19.
    
 0.684
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.682
Scn2b
Sodium channel, voltage-gated, type II, beta.
   
 0.600
IFT43
Intraflagellar transport 43.
    
 0.494
LOC109951927
Calcium channel, voltage dependent, alpha2/delta subunit 3.
   
 0.478
CACNA2D3
Calcium voltage-gated channel auxiliary subunit alpha2delta 3.
   
 0.478
LOC109956360
Calcium channel, voltage-dependent, alpha 2/delta subunit 4b.
   
 0.478
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.