STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr44WD repeat domain 44. (911 aa)    
Predicted Functional Partners:
clec16a
C-type lectin domain containing 16A.
      
 0.701
aqr
Aquarius intron-binding spliceosomal factor.
      
 0.699
pank4
Pantothenate kinase.
      
 0.586
CBS
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
      
 0.585
eif4a3
Eukaryotic translation initiation factor 4A3.
      
 0.584
kansl2
KAT8 regulatory NSL complex subunit 2.
      
 0.487
LOC109968986
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
  
 0.474
rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
   
  
 0.474
LOC109961590
Uncharacterized protein.
   
  
 0.474
RBPMS
RNA binding protein, mRNA processing factor.
      
 0.461
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.