STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ercc6Excision repair cross-complementation group 6. (1450 aa)    
Predicted Functional Partners:
LOC109951387
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.997
ercc8
Excision repair cross-complementation group 8.
    
 0.987
xpa
Xeroderma pigmentosum, complementation group A.
    
 0.986
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.985
polr2d
Polymerase (RNA) II (DNA directed) polypeptide D.
    
 0.980
ddb1
Damage-specific DNA binding protein 1.
    
 0.971
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
   
 0.965
polr2g
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
 0.965
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 0.964
ercc5
Excision repair cross-complementation group 5.
   
 0.960
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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