STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d25TBC1 domain family, member 25. (858 aa)    
Predicted Functional Partners:
rab33b
RAB33B, member RAS oncogene family a.
     
 0.809
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.765
GABARAPL2-2
GABA(A) receptor-associated protein like 2.
   
 0.765
gabarap
GABA(A) receptor-associated protein b.
   
 0.765
map1lc3b
Microtubule-associated protein 1 light chain 3 beta.
   
 0.734
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
   
 0.734
LOC109957581
RAB33A, member RAS oncogene family.
     
 0.732
LOC109965400
Zgc:101559.
     
 0.683
armc5
Armadillo repeat containing 5.
   
 0.588
ENSMALP00000010755
RAB9B, member RAS oncogene family.
   
 0.588
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.