lsm2 protein (Monopterus albus) - STRING interaction network

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Score

lsm2

U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)

Predicted Functional Partners:

lsm8

0.999

lsm1

0.999

lsm6

0.999

lsm3

0.999

lsm5

0.999

snrpd2

0.999

lsm7

0.999

lsm4

0.999

Snrpf

0.996

sart3

0.996

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Snrpf	lsm1	ENSMALP00000017725	ENSMALP00000001977	Small nuclear ribonucleoprotein polypeptide F.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.815
Snrpf	lsm2	ENSMALP00000017725	ENSMALP00000023640	Small nuclear ribonucleoprotein polypeptide F.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
Snrpf	lsm3	ENSMALP00000017725	ENSMALP00000009110	Small nuclear ribonucleoprotein polypeptide F.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.973
Snrpf	lsm4	ENSMALP00000017725	ENSMALP00000026148	Small nuclear ribonucleoprotein polypeptide F.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.981
Snrpf	lsm5	ENSMALP00000017725	ENSMALP00000014742	Small nuclear ribonucleoprotein polypeptide F.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.996
Snrpf	lsm6	ENSMALP00000017725	ENSMALP00000003297	Small nuclear ribonucleoprotein polypeptide F.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.976
Snrpf	lsm7	ENSMALP00000017725	ENSMALP00000020750	Small nuclear ribonucleoprotein polypeptide F.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.992
Snrpf	lsm8	ENSMALP00000017725	ENSMALP00000000460	Small nuclear ribonucleoprotein polypeptide F.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.988
Snrpf	snrpd2	ENSMALP00000017725	ENSMALP00000015106	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D2.	0.999
lsm1	Snrpf	ENSMALP00000001977	ENSMALP00000017725	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Small nuclear ribonucleoprotein polypeptide F.	0.815
lsm1	lsm2	ENSMALP00000001977	ENSMALP00000023640	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
lsm1	lsm3	ENSMALP00000001977	ENSMALP00000009110	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.984
lsm1	lsm4	ENSMALP00000001977	ENSMALP00000026148	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
lsm1	lsm5	ENSMALP00000001977	ENSMALP00000014742	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
lsm1	lsm6	ENSMALP00000001977	ENSMALP00000003297	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
lsm1	lsm7	ENSMALP00000001977	ENSMALP00000020750	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
lsm1	lsm8	ENSMALP00000001977	ENSMALP00000000460	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.988
lsm1	sart3	ENSMALP00000001977	ENSMALP00000020828	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.585
lsm1	snrpd2	ENSMALP00000001977	ENSMALP00000015106	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Small nuclear ribonucleoprotein Sm D2.	0.788
lsm2	Snrpf	ENSMALP00000023640	ENSMALP00000017725	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein polypeptide F.	0.996