STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wwp1E3 ubiquitin-protein ligase. (877 aa)    
Predicted Functional Partners:
LOC109974756
Uncharacterized protein.
    
 0.818
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.790
rps27a
Ribosomal protein S27a.
    
 0.778
ube2l3
Ubiquitin-conjugating enzyme E2L 3b; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.699
smad6
Mothers against decapentaplegic homolog.
    
 0.660
LOC109963297
Mothers against decapentaplegic homolog.
    
 0.660
smad7
Mothers against decapentaplegic homolog.
    
 0.660
LOC109952280
NUMB like endocytic adaptor protein.
    
 0.658
numb
NUMB endocytic adaptor protein.
    
 0.658
LOC109967119
E3 ubiquitin-protein ligase.
  
 
0.643
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.