STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itgb5Integrin beta; Belongs to the integrin beta chain family. (803 aa)    
Predicted Functional Partners:
vtn
Vitronectin b.
    
 0.971
itgav
Integrin, alpha V; Belongs to the integrin alpha chain family.
   
 0.964
LOC109960718
Talin 1.
   
 0.937
SRC
Tyrosine-protein kinase.
   
 0.937
LOC109970991
Tyrosine-protein kinase.
   
 0.937
LOC109954591
Talin 2a.
   
 0.880
LOC109966589
Talin 2b.
   
 0.880
LOC109955938
Paxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family.
   
 0.846
LOC109959657
Tenascin C.
   
0.817
ENSMALP00000008063
Uncharacterized protein.
    
 0.817
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.