STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nme9NME/NM23 family member 8; Belongs to the NDK family. (612 aa)    
Predicted Functional Partners:
LOC109956145
Thioredoxin reductase 3.
  
 0.969
txnrd2
Thioredoxin reductase 2, tandem duplicate 1; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 0.969
msra
Methionine sulfoxide reductase A.
  
 0.967
LOC109955222
Si:ch1073-358c10.1.
  
 0.967
LOC109957919
Thioredoxin domain-containing protein.
  
 0.959
LOC109970654
Peroxiredoxin 1.
  
 0.959
dennd10
DENN domain containing 10.
  
 0.959
prdx3
Peroxiredoxin 3.
  
 0.959
LOC109959605
Peroxiredoxin 4.
  
 0.959
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
  
 0.952
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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