STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdf4Stromal cell derived factor 4. (357 aa)    
Predicted Functional Partners:
LOC109972446
Parvalbumin 6; Belongs to the parvalbumin family.
      
 0.591
s100b
S100 calcium binding protein, beta (neural); Belongs to the S-100 family.
      
 0.590
CALML6
Calmodulin like 6.
      
 0.505
ENSMALP00000029771
EF-hand domain-containing protein; Belongs to the S-100 family.
    
 
 0.455
calb2
Calbindin 2b.
      
 0.428
LOC109952934
Calbindin 2a.
      
 0.428
calml4
Calmodulin-like 4a.
      
 0.418
LOC109956213
EF-hand domain-containing protein.
      
 0.407
ENSMALP00000029748
EF-hand domain-containing protein.
      
 0.407
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.