STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
def6DEF6 guanine nucleotide exchange factor a. (601 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.816
LOC109968299
RAN binding protein 2.
    
 0.609
ENSMALP00000009457
Uncharacterized protein.
   
 0.505
ENSMALP00000020448
DUF4062 domain-containing protein.
   
 0.505
rbbp5
Retinoblastoma binding protein 5.
    
 0.505
KDM6B
Lysine demethylase 6B.
    
 0.501
ENSMALP00000022113
Lysine (K)-specific demethylase 6B, b.
    
 0.501
LOC109973222
Lysine (K)-specific demethylase 6A, like.
    
 0.501
kdm6a
Lysine (K)-specific demethylase 6A.
    
 0.501
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.495
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.