DMXL1 protein (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DMXL1

Dmx like 1. (2735 aa)

Predicted Functional Partners:

rogdi

0.908

skp1

0.871

ATP6V1B2

0.753

LOC109964333

0.753

LOC109959930

0.667

LOC109961855

0.667

WDR7

0.648

atp6v1c1

0.596

LOC109963928

0.596

LOC109964947

0.567

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP6V1B2	DMXL1	ENSMALP00000000292	ENSMALP00000027066	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	Dmx like 1.	0.753
ATP6V1B2	LOC109959930	ENSMALP00000000292	ENSMALP00000014189	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	ATPase H+ transporting V1 subunit E1b.	0.989
ATP6V1B2	LOC109961855	ENSMALP00000000292	ENSMALP00000031146	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	ATPase H+ transporting V1 subunit E1a.	0.989
ATP6V1B2	LOC109963928	ENSMALP00000000292	ENSMALP00000020770	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.968
ATP6V1B2	LOC109964947	ENSMALP00000000292	ENSMALP00000017477	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.950
ATP6V1B2	WDR7	ENSMALP00000000292	ENSMALP00000001129	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	WD repeat domain 7.	0.499
ATP6V1B2	atp6v1c1	ENSMALP00000000292	ENSMALP00000011150	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.968
ATP6V1B2	rogdi	ENSMALP00000000292	ENSMALP00000005322	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	Rogdi atypical leucine zipper.	0.672
DMXL1	ATP6V1B2	ENSMALP00000027066	ENSMALP00000000292	Dmx like 1.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.753
DMXL1	LOC109959930	ENSMALP00000027066	ENSMALP00000014189	Dmx like 1.	ATPase H+ transporting V1 subunit E1b.	0.667
DMXL1	LOC109961855	ENSMALP00000027066	ENSMALP00000031146	Dmx like 1.	ATPase H+ transporting V1 subunit E1a.	0.667
DMXL1	LOC109963928	ENSMALP00000027066	ENSMALP00000020770	Dmx like 1.	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.596
DMXL1	LOC109964333	ENSMALP00000027066	ENSMALP00000015046	Dmx like 1.	ATPase, H+ transporting, lysosomal, V1 subunit B, member a.	0.753
DMXL1	LOC109964947	ENSMALP00000027066	ENSMALP00000017477	Dmx like 1.	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.567
DMXL1	WDR7	ENSMALP00000027066	ENSMALP00000001129	Dmx like 1.	WD repeat domain 7.	0.648
DMXL1	atp6v1c1	ENSMALP00000027066	ENSMALP00000011150	Dmx like 1.	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.596
DMXL1	rogdi	ENSMALP00000027066	ENSMALP00000005322	Dmx like 1.	Rogdi atypical leucine zipper.	0.908
DMXL1	skp1	ENSMALP00000027066	ENSMALP00000023656	Dmx like 1.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.871
LOC109959930	ATP6V1B2	ENSMALP00000014189	ENSMALP00000000292	ATPase H+ transporting V1 subunit E1b.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.989
LOC109959930	DMXL1	ENSMALP00000014189	ENSMALP00000027066	ATPase H+ transporting V1 subunit E1b.	Dmx like 1.	0.667