STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMALP00000027203LAM_G_DOMAIN domain-containing protein. (280 aa)    
Predicted Functional Partners:
ENSMALP00000025351
Fibrillar collagen NC1 domain-containing protein.
 
      0.899
LOC109967770
Procollagen, type V, alpha 1.
 
      0.898
col1a2
Collagen, type I, alpha 2.
 
 
 
  0.704
LOC109966086
Collagen, type II, alpha 1a.
 
 
 
  0.640
ENSMALP00000028298
Fibrillar collagen NC1 domain-containing protein.
 
      0.637
LOC109974887
Collagen, type I, alpha 1b.
 
 
 
  0.621
LOC109951101
Collagen, type I, alpha 1a.
 
 
 
  0.487
ENSMALP00000013508
Collagen, type II, alpha 1b.
 
 
 
  0.472
LOC109968038
Collagen, type X, alpha 1a.
 
      0.449
col9a2
Procollagen, type IX, alpha 2.
 
 
 
  0.444
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.