STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec62SEC62 homolog, preprotein translocation factor. (425 aa)    
Predicted Functional Partners:
sec63
SEC63 homolog, protein translocation regulator.
   
 0.999
sec61g
SEC61 translocon gamma subunit.
    
 
 0.995
sec61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.959
sec61a1
Plug_translocon domain-containing protein.
   
 
 0.931
LOC109964524
Plug_translocon domain-containing protein.
   
 
 0.931
oxsr1
Oxidative stress responsive kinase 1b.
    
 
 0.884
LOC109962630
Oxidative stress responsive kinase 1a.
    
 
 0.884
stk39
Serine threonine kinase 39.
    
 
 0.884
strada
STE20 related adaptor alpha.
    
 
 0.842
STRADB
STE20 related adaptor beta.
    
 
 0.842
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.