LOC109971570 protein (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC109971570

G_PROTEIN_RECEP_F1_2 domain-containing protein. (414 aa)

Predicted Functional Partners:

gnrh1

0.968

LOC109952059

0.945

LOC109961546

0.945

gnas

0.925

LOC109970238

0.925

LOC109961329

0.924

LOC109972348

0.917

gnrh2

0.637

CDC42

0.613

RAC1

0.599

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	LOC109971570	ENSMALP00000019476	ENSMALP00000027360	Cell division cycle 42.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.613
CDC42	RAC1	ENSMALP00000019476	ENSMALP00000024025	Cell division cycle 42.	Rac family small GTPase 1.	0.607
LOC109952059	LOC109961546	ENSMALP00000014701	ENSMALP00000016388	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	Uncharacterized protein.	0.910
LOC109952059	LOC109971570	ENSMALP00000014701	ENSMALP00000027360	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.945
LOC109952059	LOC109972348	ENSMALP00000014701	ENSMALP00000005241	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	Uncharacterized protein.	0.901
LOC109961329	LOC109971570	ENSMALP00000025578	ENSMALP00000027360	Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.924
LOC109961329	gnrh1	ENSMALP00000025578	ENSMALP00000026908	Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.	Uncharacterized protein.	0.929
LOC109961329	gnrh2	ENSMALP00000025578	ENSMALP00000003564	Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.	Uncharacterized protein.	0.701
LOC109961546	LOC109952059	ENSMALP00000016388	ENSMALP00000014701	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	0.910
LOC109961546	LOC109971570	ENSMALP00000016388	ENSMALP00000027360	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.945
LOC109961546	LOC109972348	ENSMALP00000016388	ENSMALP00000005241	Uncharacterized protein.	Uncharacterized protein.	0.901
LOC109970238	LOC109971570	ENSMALP00000015220	ENSMALP00000027360	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.925
LOC109970238	gnas	ENSMALP00000015220	ENSMALP00000004912	Uncharacterized protein.	GNAS complex locus.	0.900
LOC109971570	CDC42	ENSMALP00000027360	ENSMALP00000019476	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Cell division cycle 42.	0.613
LOC109971570	LOC109952059	ENSMALP00000027360	ENSMALP00000014701	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	0.945
LOC109971570	LOC109961329	ENSMALP00000027360	ENSMALP00000025578	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.	0.924
LOC109971570	LOC109961546	ENSMALP00000027360	ENSMALP00000016388	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.945
LOC109971570	LOC109970238	ENSMALP00000027360	ENSMALP00000015220	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.925
LOC109971570	LOC109972348	ENSMALP00000027360	ENSMALP00000005241	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.917
LOC109971570	RAC1	ENSMALP00000027360	ENSMALP00000024025	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Rac family small GTPase 1.	0.599