STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prpf38bUncharacterized protein. (464 aa)    
Predicted Functional Partners:
prpf38a
Pre-mRNA processing factor 38A.
     
 
0.900
uchl5
Ubiquitin carboxyl-terminal hydrolase.
 
      0.885
LOC109974756
Uncharacterized protein.
    
   0.804
pnn
Pinin, desmosome associated protein.
   
    0.718
luc7l3
Uncharacterized protein.
   
 
0.697
LOC109962270
RNA binding motif protein 25b.
   
  
 0.647
ENSMALP00000029565
RNA binding motif protein 25a.
   
  
 0.647
prpf4b
Pre-mRNA processing factor 4Bb.
   
  
 0.586
dlgap3
Discs, large (Drosophila) homolog-associated protein 3.
      
 0.582
atp6v1d
ATPase H+ transporting V1 subunit D.
      
 0.575
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
Server load: low (18%) [HD]