LOC109962813 protein (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC109962813

Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family. (480 aa)

Predicted Functional Partners:

ENSMALP00000000809

0.894

LOC109971373

0.764

sst

0.650

bbs2

0.571

bbs7

0.569

bbs1

0.548

smo

0.543

bbs9

0.521

bbs4

0.514

lztfl1

0.501

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMALP00000000809	LOC109962813	ENSMALP00000000809	ENSMALP00000028111	Uncharacterized protein.	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	0.894
ENSMALP00000000809	LOC109971373	ENSMALP00000000809	ENSMALP00000030804	Uncharacterized protein.	Cortistatin.	0.978
ENSMALP00000000809	sst	ENSMALP00000000809	ENSMALP00000000794	Uncharacterized protein.	Somatostatin 1, tandem duplicate 2.	0.939
LOC109962813	ENSMALP00000000809	ENSMALP00000028111	ENSMALP00000000809	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.894
LOC109962813	LOC109971373	ENSMALP00000028111	ENSMALP00000030804	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	Cortistatin.	0.764
LOC109962813	bbs1	ENSMALP00000028111	ENSMALP00000017598	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	Bardet-Biedl syndrome 1.	0.548
LOC109962813	bbs2	ENSMALP00000028111	ENSMALP00000012506	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	Bardet-Biedl syndrome 2 protein homolog.	0.571
LOC109962813	bbs4	ENSMALP00000028111	ENSMALP00000020506	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	Bardet-Biedl syndrome 4.	0.514
LOC109962813	bbs7	ENSMALP00000028111	ENSMALP00000009697	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.569
LOC109962813	bbs9	ENSMALP00000028111	ENSMALP00000011922	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	Bardet-Biedl syndrome 9.	0.521
LOC109962813	lztfl1	ENSMALP00000028111	ENSMALP00000009114	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	Leucine zipper transcription factor-like 1.	0.501
LOC109962813	smo	ENSMALP00000028111	ENSMALP00000020954	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	0.543
LOC109962813	sst	ENSMALP00000028111	ENSMALP00000000794	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	Somatostatin 1, tandem duplicate 2.	0.650
LOC109971373	ENSMALP00000000809	ENSMALP00000030804	ENSMALP00000000809	Cortistatin.	Uncharacterized protein.	0.978
LOC109971373	LOC109962813	ENSMALP00000030804	ENSMALP00000028111	Cortistatin.	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	0.764
LOC109971373	sst	ENSMALP00000030804	ENSMALP00000000794	Cortistatin.	Somatostatin 1, tandem duplicate 2.	0.949
bbs1	LOC109962813	ENSMALP00000017598	ENSMALP00000028111	Bardet-Biedl syndrome 1.	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.	0.548
bbs1	bbs2	ENSMALP00000017598	ENSMALP00000012506	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 2 protein homolog.	0.992
bbs1	bbs4	ENSMALP00000017598	ENSMALP00000020506	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 4.	0.991
bbs1	bbs7	ENSMALP00000017598	ENSMALP00000009697	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.991