STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109957636Interferon regulatory factor 4a. (450 aa)    
Predicted Functional Partners:
LOC109966830
Interferon regulatory factor.
  
0.608
spi1
Spi-1 proto-oncogene b.
   
 
 0.548
CDC25B
Cell division cycle 25B.
   
 0.462
plk2
Serine/threonine-protein kinase PLK.
   
 0.461
plk3
Serine/threonine-protein kinase PLK.
   
 0.461
PLK1
Serine/threonine-protein kinase PLK.
   
 0.461
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.455
sting1
Transmembrane protein 173.
   
 0.436
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
   
 0.423
ep300
E1A binding protein p300 b.
    
 0.412
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.