STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adamts18ADAM metallopeptidase with thrombospondin type 1 motif, 18. (1210 aa)    
Predicted Functional Partners:
sall4
Spalt-like transcription factor 4.
   
  
 0.551
ush1c
Usher syndrome 1C.
      
 0.549
irx3
Iroquois homeobox 3a.
   
  
 0.525
ENSMALP00000014156
Beta 3-glucosyltransferase b.
    
 0.487
LOC109967504
Beta 3-glucosyltransferase a.
    
 0.487
ENSMALP00000010863
Uncharacterized protein.
    
 
 0.476
ccdc51
Coiled-coil domain containing 51.
      
 0.461
pofut2
Protein O-fucosyltransferase 2.
     
 0.461
ENSMALP00000022716
Selenoprotein S.
      
 0.452
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.