STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109960059Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a. (246 aa)    
Predicted Functional Partners:
LOC109969664
Apobec1 complementation factor.
     
 0.691
rbm47
RNA binding motif protein 47.
     
 0.638
ada
Adenosine deaminase.
   
  
 0.534
aicda
Activation-induced cytidine deaminase.
     
0.492
LOC109964392
Myosin, light chain 1, alkali; skeletal, fast.
   
  
 0.472
ampd1
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
   
  
 0.456
srp19
Signal recognition particle 19.
      
 0.434
asmtl
Acetylserotonin O-methyltransferase-like.
      
 0.430
dnd1
DND microRNA-mediated repression inhibitor 1.
     
 0.423
rbm46
RNA binding motif protein 46.
     
 0.423
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.