STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptprfProtein tyrosine phosphatase receptor type Fa. (1842 aa)    
Predicted Functional Partners:
il1rap
Uncharacterized protein.
    
 0.755
SLITRK1
SLIT and NTRK like family member 1.
    
 0.724
slitrk2
SLIT and NTRK-like family, member 2.
    
 0.655
LOC109969925
Tyrosine-protein kinase receptor.
   
 0.617
LOC109972366
Tyrosine-protein kinase receptor.
   
0.617
LOC109967270
Tyrosine-protein kinase receptor.
   
0.617
ntrk1
Tyrosine-protein kinase receptor.
   
 0.617
ntrk2
Tyrosine-protein kinase receptor.
   
 0.617
grb2
Growth factor receptor-bound protein 2b.
   
 0.597
LOC109962139
Leucine rich repeat and fibronectin type III domain containing 5b.
    
 0.577
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.