STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptgr2Prostaglandin reductase 2. (352 aa)    
Predicted Functional Partners:
metap1d
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
  
  
 0.614
cat
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.510
acad11
Acyl-CoA dehydrogenase family, member 11.
  
  
 0.428
myoz1
Uncharacterized protein.
      
 0.426
LOC109968263
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 2.
   
 
 0.425
ENSMALP00000008714
Aldo_ket_red domain-containing protein.
   
 
 0.425
LOC109967240
Zgc:56622.
   
 
 0.425
akr1a1
Aldo-keto reductase family 1, member A1b (aldehyde reductase).
   
 
 0.425
AKR1D1
Aldo-keto reductase family 1 member D1.
   
 
 0.425
yipf6
Protein YIPF.
   
  
 0.423
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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