STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdp2Tyrosyl-DNA phosphodiesterase 2b. (365 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
 
 0.806
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.804
LOC109974756
Uncharacterized protein.
    
 
 0.723
tdp1
Tyrosyl-DNA phosphodiesterase 1.
   
  
 0.705
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
     
 0.634
prkdc
Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family.
     
 0.613
sumo2
Small ubiquitin-related modifier.
   
 
 0.608
LOC109957172
Small ubiquitin-related modifier.
   
 
 0.608
LOC109968062
Small ubiquitin-related modifier.
   
 
 0.608
LOC109966247
Small ubiquitin-related modifier.
   
 
 0.608
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.