STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mib1Mindbomb E3 ubiquitin protein ligase 1. (995 aa)    
Predicted Functional Partners:
trip11
Thyroid hormone receptor interactor 11.
    
 0.600
pcm1
Pericentriolar material 1.
    
 0.597
LOC109963908
Nance-Horan syndrome b (congenital cataracts and dental anomalies).
   
 0.538
nhs
Nance-Horan syndrome a (congenital cataracts and dental anomalies).
   
 0.538
epb41l5
Erythrocyte membrane protein band 4.1 like 5.
    
 
 0.533
mib2
Mindbomb E3 ubiquitin protein ligase 2.
  
0.522
ENSMALP00000014630
Uncharacterized protein.
   
  0.519
zmym4
Si:ch211-173p18.3.
   
  0.519
LOC109972806
Uncharacterized protein.
   
  0.519
casp9
Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
  0.513
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.