STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109964621Ceramide synthase 5. (398 aa)    
Predicted Functional Partners:
kdsr
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.936
degs2
Delta(4)-desaturase, sphingolipid 2.
   
 0.932
degs1
Delta(4)-desaturase, sphingolipid 1.
   
 0.932
smpd2
Sphingomyelin phosphodiesterase 2b, neutral membrane (neutral sphingomyelinase).
     
 0.925
ugcg
UDP-glucose ceramide glucosyltransferase.
   
 
 0.923
SGPP2
Sphingosine-1-phosphate phosphatase 2.
    
 0.923
LOC109954458
Si:ch211-212g7.6.
    
 0.919
LOC109966615
acidPPc domain-containing protein.
    
 0.919
plpp2
Phospholipid phosphatase 2a.
    
 0.917
LOC109964011
Phospholipid phosphatase 2b.
    
 0.917
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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