STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109961850Uncharacterized protein. (927 aa)    
Predicted Functional Partners:
LOC109967894
Uncharacterized protein.
  
  0.512
ush1c
Usher syndrome 1C.
    
 
 0.492
LOC109974758
Upper zone of growth plate and cartilage matrix associated b.
     
 0.486
LOC109969818
Consortin, connexin sorting protein b.
  
 
  0.458
sergef
Secretion regulating guanine nucleotide exchange factor.
    
 0.450
LOC109957914
Kruppel-like factor 1 (erythroid).
  
 
   0.448
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.447
Sync
Uncharacterized protein.
  
 
  0.418
arid4a
AT rich interactive domain 4A (RBP1-like).
  
 
 0.402
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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