STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlrc5NACHT domain-containing protein. (1699 aa)    
Predicted Functional Partners:
ifih1
Interferon induced with helicase C domain 1.
   
 0.781
LOC109954493
Protein kinase domain-containing protein.
   
 0.749
LOC109961044
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.749
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.749
usp14
Ubiquitin carboxyl-terminal hydrolase.
    
 0.676
LOC109974756
Uncharacterized protein.
    
  0.662
rps27a
Ribosomal protein S27a.
    
  0.662
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
  0.616
LOC109966830
Interferon regulatory factor.
   
 
 0.610
rfxank
Regulatory factor X-associated ankyrin-containing protein.
   
 
 0.600
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.