STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109954084Matrilin 3a. (294 aa)    
Predicted Functional Partners:
lum
Lumican.
   
 0.666
MFAP2
Microfibril associated protein 2.
   
 0.503
LOC109970233
Microfibril associated protein 5.
   
 0.489
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
   
 0.458
LOC109963227
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.457
LOC109962881
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
   
 
 0.451
furin
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
   
 
 0.451
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.432
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.432
itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.430
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.