LOC109952311 protein (Monopterus albus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC109952311

Si:dkey-34e4.1. (656 aa)

Predicted Functional Partners:

nup107

0.703

ENSMALP00000032250

0.598

sntb2

0.589

sntb1

0.589

SNTA1

0.589

LOC109964061

0.588

LOC109964063

0.588

gda

0.576

amdhd1

0.576

plgrkt

0.569

Your Current Organism:

Monopterus albus

NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMALP00000032250	LOC109952311	ENSMALP00000032250	ENSMALP00000032472	Uncharacterized protein.	Si:dkey-34e4.1.	0.598
LOC109952311	ENSMALP00000032250	ENSMALP00000032472	ENSMALP00000032250	Si:dkey-34e4.1.	Uncharacterized protein.	0.598
LOC109952311	LOC109964061	ENSMALP00000032472	ENSMALP00000027560	Si:dkey-34e4.1.	Uncharacterized protein.	0.588
LOC109952311	LOC109964063	ENSMALP00000032472	ENSMALP00000027583	Si:dkey-34e4.1.	Uncharacterized protein.	0.588
LOC109952311	SNTA1	ENSMALP00000032472	ENSMALP00000015686	Si:dkey-34e4.1.	Syntrophin alpha 1.	0.589
LOC109952311	amdhd1	ENSMALP00000032472	ENSMALP00000017758	Si:dkey-34e4.1.	Amidohydrolase domain containing 1.	0.576
LOC109952311	gda	ENSMALP00000032472	ENSMALP00000010043	Si:dkey-34e4.1.	Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.	0.576
LOC109952311	nup107	ENSMALP00000032472	ENSMALP00000003556	Si:dkey-34e4.1.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.703
LOC109952311	plgrkt	ENSMALP00000032472	ENSMALP00000025611	Si:dkey-34e4.1.	Plasminogen receptor, C-terminal lysine transmembrane protein.	0.569
LOC109952311	sntb1	ENSMALP00000032472	ENSMALP00000012260	Si:dkey-34e4.1.	Syntrophin, basic 1.	0.589
LOC109952311	sntb2	ENSMALP00000032472	ENSMALP00000004481	Si:dkey-34e4.1.	Syntrophin, beta 2.	0.589
LOC109964061	LOC109952311	ENSMALP00000027560	ENSMALP00000032472	Uncharacterized protein.	Si:dkey-34e4.1.	0.588
LOC109964063	LOC109952311	ENSMALP00000027583	ENSMALP00000032472	Uncharacterized protein.	Si:dkey-34e4.1.	0.588
SNTA1	LOC109952311	ENSMALP00000015686	ENSMALP00000032472	Syntrophin alpha 1.	Si:dkey-34e4.1.	0.589
amdhd1	LOC109952311	ENSMALP00000017758	ENSMALP00000032472	Amidohydrolase domain containing 1.	Si:dkey-34e4.1.	0.576
gda	LOC109952311	ENSMALP00000010043	ENSMALP00000032472	Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.	Si:dkey-34e4.1.	0.576
nup107	LOC109952311	ENSMALP00000003556	ENSMALP00000032472	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Si:dkey-34e4.1.	0.703
plgrkt	LOC109952311	ENSMALP00000025611	ENSMALP00000032472	Plasminogen receptor, C-terminal lysine transmembrane protein.	Si:dkey-34e4.1.	0.569
sntb1	LOC109952311	ENSMALP00000012260	ENSMALP00000032472	Syntrophin, basic 1.	Si:dkey-34e4.1.	0.589
sntb2	LOC109952311	ENSMALP00000004481	ENSMALP00000032472	Syntrophin, beta 2.	Si:dkey-34e4.1.	0.589