Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRG18854.1 | KRG18855.1 | CC99x_01335 | CC99x_01336 | DNA utilization protein GntX. | Hypothetical protein. | 0.598 |
KRG18854.1 | KRG18856.1 | CC99x_01335 | CC99x_01337 | DNA utilization protein GntX. | Chaperone protein DnaJ. | 0.598 |
KRG18854.1 | modA | CC99x_01335 | CC99x_01338 | DNA utilization protein GntX. | Molybdate-binding periplasmic protein precursor. | 0.470 |
KRG18855.1 | KRG18854.1 | CC99x_01336 | CC99x_01335 | Hypothetical protein. | DNA utilization protein GntX. | 0.598 |
KRG18855.1 | KRG18856.1 | CC99x_01336 | CC99x_01337 | Hypothetical protein. | Chaperone protein DnaJ. | 0.773 |
KRG18855.1 | modA | CC99x_01336 | CC99x_01338 | Hypothetical protein. | Molybdate-binding periplasmic protein precursor. | 0.499 |
KRG18856.1 | KRG18854.1 | CC99x_01337 | CC99x_01335 | Chaperone protein DnaJ. | DNA utilization protein GntX. | 0.598 |
KRG18856.1 | KRG18855.1 | CC99x_01337 | CC99x_01336 | Chaperone protein DnaJ. | Hypothetical protein. | 0.773 |
KRG18856.1 | groL | CC99x_01337 | CC99x_02041 | Chaperone protein DnaJ. | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.812 |
KRG18856.1 | modA | CC99x_01337 | CC99x_01338 | Chaperone protein DnaJ. | Molybdate-binding periplasmic protein precursor. | 0.499 |
artQ_1 | modA | CC99x_00765 | CC99x_01338 | Arginine transport system permease protein ArtQ. | Molybdate-binding periplasmic protein precursor. | 0.418 |
artQ_1 | potA | CC99x_00765 | CC99x_01668 | Arginine transport system permease protein ArtQ. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.441 |
cmpD | modA | CC99x_00771 | CC99x_01338 | Bicarbonate transport ATP-binding protein CmpD. | Molybdate-binding periplasmic protein precursor. | 0.678 |
cmpD | rubA | CC99x_00771 | CC99x_01086 | Bicarbonate transport ATP-binding protein CmpD. | Rubredoxin. | 0.757 |
groL | KRG18856.1 | CC99x_02041 | CC99x_01337 | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Chaperone protein DnaJ. | 0.812 |
groL | modA | CC99x_02041 | CC99x_01338 | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | Molybdate-binding periplasmic protein precursor. | 0.436 |
modA | KRG18854.1 | CC99x_01338 | CC99x_01335 | Molybdate-binding periplasmic protein precursor. | DNA utilization protein GntX. | 0.470 |
modA | KRG18855.1 | CC99x_01338 | CC99x_01336 | Molybdate-binding periplasmic protein precursor. | Hypothetical protein. | 0.499 |
modA | KRG18856.1 | CC99x_01338 | CC99x_01337 | Molybdate-binding periplasmic protein precursor. | Chaperone protein DnaJ. | 0.499 |
modA | artQ_1 | CC99x_01338 | CC99x_00765 | Molybdate-binding periplasmic protein precursor. | Arginine transport system permease protein ArtQ. | 0.418 |
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