Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRG17873.1 | KRG17874.1 | CC99x_01996 | CC99x_01997 | Hypothetical protein. | 2-oxoglutaramate amidase. | 0.823 |
KRG17873.1 | KRG17875.1 | CC99x_01996 | CC99x_01998 | Hypothetical protein. | Protease TldD. | 0.821 |
KRG17873.1 | KRG17876.1 | CC99x_01996 | CC99x_01999 | Hypothetical protein. | Peptidase PmbA. | 0.586 |
KRG17873.1 | bamE | CC99x_01996 | CC99x_01496 | Hypothetical protein. | Outer membrane protein assembly factor BamE precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.599 |
KRG17873.1 | ftsB | CC99x_01996 | CC99x_00261 | Hypothetical protein. | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.714 |
KRG17873.1 | ftsQ | CC99x_01996 | CC99x_01594 | Hypothetical protein. | Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.620 |
KRG17873.1 | rng | CC99x_01996 | CC99x_01995 | Hypothetical protein. | Ribonuclease G. | 0.785 |
KRG17873.1 | secE | CC99x_01996 | CC99x_01046 | Hypothetical protein. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. | 0.582 |
KRG17873.1 | smg | CC99x_01996 | CC99x_01321 | Hypothetical protein. | Hypothetical protein; Belongs to the Smg family. | 0.607 |
KRG17873.1 | sspB | CC99x_01996 | CC99x_01808 | Hypothetical protein. | Stringent starvation protein B. | 0.584 |
KRG17874.1 | KRG17873.1 | CC99x_01997 | CC99x_01996 | 2-oxoglutaramate amidase. | Hypothetical protein. | 0.823 |
KRG17874.1 | KRG17875.1 | CC99x_01997 | CC99x_01998 | 2-oxoglutaramate amidase. | Protease TldD. | 0.764 |
KRG17874.1 | KRG17876.1 | CC99x_01997 | CC99x_01999 | 2-oxoglutaramate amidase. | Peptidase PmbA. | 0.499 |
KRG17874.1 | rng | CC99x_01997 | CC99x_01995 | 2-oxoglutaramate amidase. | Ribonuclease G. | 0.785 |
KRG17875.1 | KRG17873.1 | CC99x_01998 | CC99x_01996 | Protease TldD. | Hypothetical protein. | 0.821 |
KRG17875.1 | KRG17874.1 | CC99x_01998 | CC99x_01997 | Protease TldD. | 2-oxoglutaramate amidase. | 0.764 |
KRG17875.1 | KRG17876.1 | CC99x_01998 | CC99x_01999 | Protease TldD. | Peptidase PmbA. | 0.965 |
KRG17875.1 | rng | CC99x_01998 | CC99x_01995 | Protease TldD. | Ribonuclease G. | 0.741 |
KRG17876.1 | KRG17873.1 | CC99x_01999 | CC99x_01996 | Peptidase PmbA. | Hypothetical protein. | 0.586 |
KRG17876.1 | KRG17874.1 | CC99x_01999 | CC99x_01997 | Peptidase PmbA. | 2-oxoglutaramate amidase. | 0.499 |
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