STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716445_00897Unannotated protein. (69 aa)    
Predicted Functional Partners:
GCA_000716445_00896
Unannotated protein.
 
     0.844
GCA_000716445_00895
Unannotated protein.
 
     0.699
GCA_000716445_08051
Unannotated protein.
  
     0.696
GCA_000716445_04182
Unannotated protein.
  
     0.607
GCA_000716445_07845
Unannotated protein.
  
     0.592
GCA_000716445_07541
Unannotated protein.
  
     0.591
GCA_000716445_04468
Unannotated protein.
  
     0.589
GCA_000716445_06242
Unannotated protein.
  
     0.506
GCA_000716445_04681
Unannotated protein.
  
     0.493
GCA_000716445_05172
Unannotated protein.
  
     0.454
Your Current Organism:
Streptomyces wedmorensis
NCBI taxonomy Id: 43759
Other names: ATCC 21239, Actinomyces wedmorensis, BCRC 12667, CCRC 12667, CCRC:12667, CECT 3245, DSM 41676, ICMP 12544, IFO 14062, JCM 4937, NBRC 14062, NRRL 3426, S. wedmorensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.