STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716445_02278Unannotated protein. (302 aa)    
Predicted Functional Partners:
GCA_000716445_02279
Unannotated protein.
 
     0.922
GCA_000716445_04953
Unannotated protein.
    
 
0.887
GCA_000716445_03661
Unannotated protein.
 
  
 
0.750
GCA_000716445_00721
Unannotated protein.
  
  0.737
GCA_000716445_04454
Unannotated protein.
  
  0.737
GCA_000716445_08199
Unannotated protein.
 
 
 0.724
GCA_000716445_04469
Unannotated protein.
 
     0.706
GCA_000716445_01058
Unannotated protein.
  
     0.695
GCA_000716445_05093
Unannotated protein.
 
     0.691
GCA_000716445_04704
Unannotated protein.
  
 
  0.690
Your Current Organism:
Streptomyces wedmorensis
NCBI taxonomy Id: 43759
Other names: ATCC 21239, Actinomyces wedmorensis, BCRC 12667, CCRC 12667, CCRC:12667, CECT 3245, DSM 41676, ICMP 12544, IFO 14062, JCM 4937, NBRC 14062, NRRL 3426, S. wedmorensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.