STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716445_05946Unannotated protein. (557 aa)    
Predicted Functional Partners:
GCA_000716445_02401
Unannotated protein.
   
 0.931
GCA_000716445_03956
Unannotated protein.
   
 0.931
GCA_000716445_01849
Unannotated protein.
   
 0.804
GCA_000716445_08066
Unannotated protein.
   
 0.795
GCA_000716445_05073
Unannotated protein.
   
 0.793
GCA_000716445_00810
Unannotated protein.
   
 0.767
GCA_000716445_02967
Unannotated protein.
   
 0.767
GCA_000716445_05888
Unannotated protein.
    
  0.762
GCA_000716445_08236
Unannotated protein.
  
  0.717
GCA_000716445_04935
Unannotated protein.
     
 0.716
Your Current Organism:
Streptomyces wedmorensis
NCBI taxonomy Id: 43759
Other names: ATCC 21239, Actinomyces wedmorensis, BCRC 12667, CCRC 12667, CCRC:12667, CECT 3245, DSM 41676, ICMP 12544, IFO 14062, JCM 4937, NBRC 14062, NRRL 3426, S. wedmorensis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.