STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716445_06838Unannotated protein. (360 aa)    
Predicted Functional Partners:
GCA_000716445_06839
Unannotated protein.
 
 0.997
GCA_000716445_06834
Unannotated protein.
 
 
 0.990
GCA_000716445_03478
Unannotated protein.
 
 
 0.921
GCA_000716445_04884
Unannotated protein.
 
 
0.914
GCA_000716445_05354
Unannotated protein.
 
 
 0.913
GCA_000716445_03474
Unannotated protein.
 
  
 0.890
GCA_000716445_03477
Unannotated protein.
 
  
 0.884
GCA_000716445_07789
Unannotated protein.
 
  
 0.838
GCA_000716445_07782
Unannotated protein.
 
  
 0.814
GCA_000716445_04883
Unannotated protein.
 
  
 0.796
Your Current Organism:
Streptomyces wedmorensis
NCBI taxonomy Id: 43759
Other names: ATCC 21239, Actinomyces wedmorensis, BCRC 12667, CCRC 12667, CCRC:12667, CECT 3245, DSM 41676, ICMP 12544, IFO 14062, JCM 4937, NBRC 14062, NRRL 3426, S. wedmorensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.