Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D8M20_05985 | D8M20_05995 | GCA_001054395_01720 | GCA_001054395_01722 | Unannotated protein. | Unannotated protein. | 0.997 |
D8M20_05985 | DI558_06755 | GCA_001054395_01720 | GCA_001054395_01721 | Unannotated protein. | Unannotated protein. | 0.999 |
D8M20_05985 | DI558_09360 | GCA_001054395_01720 | GCA_001054395_02156 | Unannotated protein. | Unannotated protein. | 0.970 |
D8M20_05985 | DI558_11005 | GCA_001054395_01720 | GCA_001054395_01631 | Unannotated protein. | Unannotated protein. | 0.906 |
D8M20_05985 | aspA-2 | GCA_001054395_01720 | GCA_001054395_01487 | Unannotated protein. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.958 |
D8M20_05985 | gabD2 | GCA_001054395_01720 | GCA_001054395_01215 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.906 |
D8M20_05985 | kgd | GCA_001054395_01720 | GCA_001054395_01528 | Unannotated protein. | Unannotated protein. | 0.983 |
D8M20_05985 | sucC | GCA_001054395_01720 | GCA_001054395_00159 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.983 |
D8M20_05985 | sucD | GCA_001054395_01720 | GCA_001054395_00160 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.986 |
D8M20_05995 | D8M20_05985 | GCA_001054395_01722 | GCA_001054395_01720 | Unannotated protein. | Unannotated protein. | 0.997 |
D8M20_05995 | DI558_06755 | GCA_001054395_01722 | GCA_001054395_01721 | Unannotated protein. | Unannotated protein. | 0.999 |
D8M20_05995 | DI558_09360 | GCA_001054395_01722 | GCA_001054395_02156 | Unannotated protein. | Unannotated protein. | 0.831 |
D8M20_05995 | sucC | GCA_001054395_01722 | GCA_001054395_00159 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.909 |
D8M20_05995 | sucD | GCA_001054395_01722 | GCA_001054395_00160 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.909 |
DI558_06755 | D8M20_05985 | GCA_001054395_01721 | GCA_001054395_01720 | Unannotated protein. | Unannotated protein. | 0.999 |
DI558_06755 | D8M20_05995 | GCA_001054395_01721 | GCA_001054395_01722 | Unannotated protein. | Unannotated protein. | 0.999 |
DI558_06755 | DI558_07000 | GCA_001054395_01721 | GCA_001054395_01282 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.920 |
DI558_06755 | DI558_09360 | GCA_001054395_01721 | GCA_001054395_02156 | Unannotated protein. | Unannotated protein. | 0.935 |
DI558_06755 | DI558_11005 | GCA_001054395_01721 | GCA_001054395_01631 | Unannotated protein. | Unannotated protein. | 0.922 |
DI558_06755 | aspA-2 | GCA_001054395_01721 | GCA_001054395_01487 | Unannotated protein. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.983 |
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