STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DI558_11575Unannotated protein. (241 aa)    
Predicted Functional Partners:
DI558_09320
Unannotated protein.
  
     0.627
DI558_05420
Unannotated protein.
  
     0.595
dapB
Unannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
       0.582
thyX
Unannotated protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
       0.581
D8M20_09370
Unannotated protein.
  
 
   0.510
DI558_07355
Unannotated protein.
  
     0.492
rnj
Unannotated protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.478
DI558_10390
Unannotated protein.
  
     0.454
dapA
Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.437
DI558_10230
Unannotated protein.
       0.402
Your Current Organism:
Corynebacterium propinquum
NCBI taxonomy Id: 43769
Other names: ATCC 51488, C. propinquum, CCUG 33048, CDC coryneform group ANF-3, CIP 103792, DSM 44285, JCM 12106, strain B 77159
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.