STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKO79871.1Arabinofuranosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)    
Predicted Functional Partners:
KKO78726.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.984
msrB
Methionine sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.
       0.830
KKO79068.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.789
KKO79932.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
KKO78437.1
Carbohydrate esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
KKO79672.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
KKO79314.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
KKO79898.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
KKO78696.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
KKO78744.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
Your Current Organism:
Corynebacterium striatum
NCBI taxonomy Id: 43770
Other names: ATCC 6940, Bacterium striatum, C. striatum, CCUG 27949, CIP 81.15, DSM 20668, IFO 15291, JCM 9390, NBRC 15291, NCTC 764
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.