STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKO79403.1Beta-carotene 15,15'-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)    
Predicted Functional Partners:
KKO79404.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.994
KKO79531.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.958
KKO79402.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.912
KKO79399.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.840
modA
Molybdate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.619
KKO77566.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.599
KKO79400.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.547
narJ
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.518
KKO77755.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.476
KKO79033.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.430
Your Current Organism:
Corynebacterium striatum
NCBI taxonomy Id: 43770
Other names: ATCC 6940, Bacterium striatum, C. striatum, CCUG 27949, CIP 81.15, DSM 20668, IFO 15291, JCM 9390, NBRC 15291, NCTC 764
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