STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL94797.1Glycosyl transferases group 1. (335 aa)    
Predicted Functional Partners:
SEM29659.1
Protein of unknown function DUF115.
  
  
 0.835
SEL94753.1
Heptosyltransferase-3.
  
 
 0.789
SEL94811.1
Methyltransferase domain-containing protein.
       0.788
SEL94722.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.774
SEL94778.1
Hypothetical protein.
       0.773
SEL94828.1
Hypothetical protein.
       0.773
SEL94839.1
Coenzyme F420-reducing hydrogenase, beta subunit.
       0.763
SEL94747.1
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase.
  
    0.743
SEL94859.1
Alg9-like mannosyltransferase family protein.
       0.484
SEL94884.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.452
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.