STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL95030.1Long-chain acyl-CoA synthetase. (564 aa)    
Predicted Functional Partners:
SEL94953.1
Long-chain acyl-CoA synthetase.
  
  
 
0.842
SEM51024.1
Long-chain acyl-CoA synthetase.
  
  
 
0.784
SEM20020.1
Long-chain acyl-CoA synthetase.
  
  
 
0.781
SEL96326.1
PAS domain S-box-containing protein.
  
 
 0.776
SEL96462.1
PAS domain S-box-containing protein.
  
 
 0.776
SEM66668.1
Signal transduction histidine kinase.
  
 
 0.776
SEM77883.1
fatty-acyl-CoA synthase.
  
  
 
0.772
SEM01299.1
PAS domain S-box-containing protein.
   
 
 0.770
SEM01949.1
PAS domain S-box-containing protein.
   
 
 0.770
SEM77183.1
PAS domain S-box-containing protein.
   
 
 0.770
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.