STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL95327.1Xaa-Pro aminopeptidase. (362 aa)    
Predicted Functional Partners:
SEL95353.1
Pentatricopeptide repeat domain-containing protein (PPR motif).
     
 0.798
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
       0.706
hisS
histidyl-tRNA synthetase.
 
  
 0.528
SEL95394.1
Type IV pilus assembly protein PilQ; Belongs to the bacterial secretin family.
       0.526
SEL95625.1
Phosphoesterase RecJ domain-containing protein.
 
     0.517
SEL95412.1
Type IV pilus assembly protein PilP.
       0.504
SEL95433.1
Type IV pilus assembly protein PilO.
       0.504
SEL95453.1
Type IV pilus assembly protein PilN.
       0.495
SEL95485.1
Type IV pilus assembly protein PilM.
       0.495
SEL95379.1
Protein of unknown function.
       0.493
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.